CDS

Accession Number TCMCG016C27573
gbkey CDS
Protein Id OMO52509.1
Location join(23922..24128,25143..25325,26123..26236,27293..27418)
Organism Corchorus capsularis
locus_tag CCACVL1_29208

Protein

Length 209aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01015497.1
Definition hypothetical protein CCACVL1_29208 [Corchorus capsularis]
Locus_tag CCACVL1_29208

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-directed RNA polymerase subunit 5-like protein 1
KEGG_TC -
KEGG_Module M00180        [VIEW IN KEGG]
M00181        [VIEW IN KEGG]
M00182        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03013        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko04623        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map04623        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005665        [VIEW IN EMBL-EBI]
GO:0005666        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005736        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGTGGCTGAAGAACAAATCACAAAGCTCTTCAAAACGCGCAGAACAGTAATGCAAATGCTGAGGGATAGGGGATATTCTGTGGATGACTCGGATATTAATATGACCAGGCAACAATTTGTTGACAAATTTGGTGAGAATGTTTATCTCAAAAGAGATGATCTTTTGATCCGTTCTTCCAAAGGAGATGCCCCGACTGATCAGATTTATGTCTTCTTTCCTGCGGACCAAAAGGTTGGGGTTCCTATGGTAAGAAACTGTGCAAAGCAAATGAAAAACGATAATGTTTTTAATGCAATTTTGGTCGTTCAAAAAGTTTTGACGGCTCCAGCAAAACAAGCAGTAGCTGAGATGAATTCATCATTTTTTCACATGGAAGTTTTCGAGGAGGCAGAGTTATTGTGCAATATCACAGAACATATGTTTGTTCCCGAGCATACAGTACTAAAAGATGAAGAAAAGAAGGATTTACTGAAAAAATTCAGGGTAAAAGAAACACAGCTACCTCGTATTCTGGTTAGTGATCCAGTTGCAAAGTATTATGGTATGAAGCGCGGACAAGTTGTCAGGATTACTCGACAAAGTGCGACTGCTGATACATATGAAACATACAGATATGCTGTATGA
Protein:  
MSVAEEQITKLFKTRRTVMQMLRDRGYSVDDSDINMTRQQFVDKFGENVYLKRDDLLIRSSKGDAPTDQIYVFFPADQKVGVPMVRNCAKQMKNDNVFNAILVVQKVLTAPAKQAVAEMNSSFFHMEVFEEAELLCNITEHMFVPEHTVLKDEEKKDLLKKFRVKETQLPRILVSDPVAKYYGMKRGQVVRITRQSATADTYETYRYAV